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PDBsum entry 1v3c

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1v3c calculated with MOLE 2.0 PDB id
1v3c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.59 23.6 -2.25 -0.74 19.0 84 3 2 3 0 0 0 1  SLB 4215 B
2 1.74 1.74 15.6 -1.97 -0.14 16.0 81 2 0 4 0 2 0 0  NAG 1 C NAG 2 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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