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PDBsum entry 1v35

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1v35 calculated with MOLE 2.0 PDB id
1v35
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.81 36.4 -1.15 -0.17 17.3 73 3 2 3 3 3 1 0  
2 1.15 1.88 40.4 0.00 0.22 4.8 78 3 1 2 8 6 1 0  NAI 501 A
3 1.34 1.34 57.1 -1.23 -0.45 12.3 78 5 2 5 3 2 1 0  
4 1.31 1.97 81.2 -0.81 0.08 10.8 78 7 3 6 9 8 1 0  NAI 601 B
5 1.29 1.89 120.8 -0.87 -0.06 9.9 81 6 5 8 10 6 1 0  NAI 601 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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