PDBsum entry 1v1j Go to PDB code:  Pore analysis for: 1v1j calculated with MOLE 2.0 PDB id 1v1j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 3.59 90.7 -1.45 -0.21 11.6 71 6 6 0 0 10 12 0  TRS 1151 A TRS 1151 K 2 1.21 3.51 90.8 -1.46 -0.26 11.5 70 5 6 0 0 10 12 0  TRS 1151 E TRS 1151 K 3 1.35 1.34 107.2 -0.61 -0.32 17.7 84 6 6 4 11 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.