PDBsum entry 1v1b Go to PDB code:  Tunnel analysis for: 1v1b calculated with MOLE 2.0 PDB id 1v1b Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.87 27.7 0.66 -0.03 9.3 85 2 1 2 5 0 0 0   2 1.31 1.37 37.5 0.24 0.09 9.8 76 1 3 2 7 3 0 0   3 1.20 1.80 28.6 1.16 0.22 4.5 63 1 1 0 7 3 0 0   4 1.09 1.09 15.7 0.49 0.02 14.6 69 1 2 0 2 0 0 0   5 1.10 1.10 16.0 0.96 0.21 11.6 57 1 1 0 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.