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PDBsum entry 1v0z

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1v0z calculated with MOLE 2.0 PDB id
1v0z
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.31 22.2 -2.27 -0.66 30.1 89 3 4 2 3 0 1 0  
2 1.38 1.49 23.6 -1.64 -0.53 24.9 87 3 4 3 4 0 1 1  
3 1.26 1.26 17.1 -2.35 -0.43 20.4 80 2 3 2 1 1 0 0  
4 1.30 1.47 19.7 -1.61 -0.44 26.8 83 3 4 1 4 1 0 1  
5 1.40 1.47 18.4 -1.43 -0.54 22.4 88 3 4 2 4 0 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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