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PDBsum entry 1v02

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1v02 calculated with MOLE 2.0 PDB id
1v02
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.51 33.5 -2.05 -0.39 25.2 77 4 5 1 2 1 2 0  
2 1.66 2.92 35.8 -2.32 -0.47 18.1 79 3 3 4 1 2 1 0  
3 1.17 1.60 41.9 -1.01 -0.14 18.2 81 7 4 4 3 3 2 0  
4 1.18 1.71 51.9 -2.32 -0.69 24.7 82 5 6 8 2 2 1 0  
5 1.46 2.60 52.5 -1.59 -0.25 18.7 79 4 4 3 4 1 2 0  
6 1.18 1.62 53.8 -1.61 -0.35 22.2 85 6 4 7 3 2 1 0  
7 1.41 3.51 65.8 -2.56 -0.47 25.4 82 5 5 6 4 2 3 0  
8 1.36 1.53 68.4 -2.08 -0.29 20.8 78 7 7 4 4 3 4 0  
9 1.52 2.33 81.4 -1.67 -0.27 18.9 76 6 8 6 3 4 4 0  
10 2.02 2.34 81.4 -2.06 -0.27 18.5 79 6 7 7 4 3 1 0  
11 1.38 3.44 82.6 -2.51 -0.47 22.8 83 5 7 10 4 3 1 0  
12 1.23 1.37 82.7 -2.50 -0.60 20.2 81 7 9 10 3 3 2 0  
13 1.36 1.34 97.2 -2.24 -0.30 19.9 78 9 10 8 4 5 3 0  
14 1.25 1.36 96.7 -2.17 -0.50 19.1 79 7 8 10 5 3 3 0  
15 1.21 1.53 98.0 -2.54 -0.64 22.5 83 6 8 13 5 3 3 0  
16 1.41 3.32 109.4 -2.26 -0.39 21.4 80 8 9 9 6 4 4 0  
17 1.20 1.74 113.7 -2.11 -0.51 21.1 80 8 9 13 6 4 3 0  
18 1.21 1.62 115.6 -1.64 -0.32 19.3 82 9 7 11 7 4 3 0  
19 1.23 1.35 124.8 -2.14 -0.51 18.4 81 10 8 10 6 4 5 0  
20 1.13 1.63 29.4 -2.17 -0.60 25.2 77 3 4 3 1 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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