 |
PDBsum entry 1ut2
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1ut2 calculated with MOLE 2.0
|
PDB id
|
|
|
|
1ut2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
20 pores,
coloured by radius |
 |
20 pores,
coloured by radius
|
20 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.17 |
3.23 |
27.4 |
-2.03 |
-0.81 |
12.7 |
93 |
 |
1 |
1 |
6 |
0 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
3.21 |
4.03 |
32.9 |
-0.65 |
-0.02 |
11.0 |
74 |
3 |
1 |
1 |
6 |
1 |
4 |
0 |
|
 |
3 |
 |
2.20 |
3.48 |
37.2 |
-0.51 |
-0.18 |
12.2 |
79 |
4 |
2 |
2 |
6 |
0 |
1 |
0 |
|
 |
4 |
 |
1.74 |
2.59 |
43.5 |
-1.95 |
-0.70 |
14.3 |
90 |
2 |
2 |
5 |
2 |
2 |
0 |
0 |
|
 |
5 |
 |
1.34 |
2.56 |
50.7 |
-0.81 |
-0.29 |
15.5 |
75 |
5 |
2 |
3 |
3 |
1 |
1 |
0 |
|
 |
6 |
 |
1.34 |
2.63 |
52.4 |
-1.48 |
-0.57 |
18.1 |
79 |
4 |
5 |
3 |
3 |
1 |
1 |
0 |
|
 |
7 |
 |
1.35 |
1.34 |
53.0 |
-1.30 |
-0.46 |
12.2 |
83 |
2 |
3 |
4 |
5 |
3 |
3 |
0 |
|
 |
8 |
 |
1.35 |
1.35 |
53.8 |
-1.21 |
-0.47 |
12.0 |
85 |
2 |
3 |
5 |
4 |
3 |
1 |
0 |
|
 |
9 |
 |
3.21 |
4.03 |
58.7 |
-1.35 |
-0.29 |
17.8 |
82 |
3 |
5 |
2 |
5 |
1 |
4 |
0 |
|
 |
10 |
 |
1.35 |
1.35 |
60.9 |
-1.05 |
-0.52 |
7.8 |
86 |
1 |
2 |
7 |
4 |
3 |
1 |
0 |
|
 |
11 |
 |
1.35 |
1.35 |
63.8 |
-1.14 |
-0.45 |
12.8 |
81 |
2 |
5 |
3 |
4 |
5 |
1 |
0 |
|
 |
12 |
 |
2.21 |
3.46 |
63.8 |
-1.23 |
-0.39 |
19.3 |
86 |
4 |
6 |
3 |
5 |
0 |
1 |
0 |
|
 |
13 |
 |
1.51 |
2.22 |
78.0 |
-1.39 |
-0.24 |
10.6 |
78 |
5 |
2 |
3 |
6 |
4 |
5 |
0 |
|
 |
14 |
 |
1.53 |
2.94 |
78.9 |
-1.36 |
-0.24 |
10.8 |
79 |
5 |
2 |
4 |
5 |
4 |
4 |
0 |
|
 |
15 |
 |
1.53 |
2.90 |
88.9 |
-1.26 |
-0.28 |
11.6 |
77 |
5 |
4 |
2 |
5 |
6 |
4 |
0 |
|
 |
16 |
 |
1.51 |
2.21 |
98.8 |
-0.95 |
-0.14 |
13.0 |
76 |
6 |
6 |
3 |
9 |
4 |
6 |
0 |
|
 |
17 |
 |
1.53 |
2.94 |
99.7 |
-0.95 |
-0.16 |
12.7 |
77 |
6 |
6 |
4 |
8 |
4 |
5 |
0 |
|
 |
18 |
 |
1.53 |
2.93 |
117.3 |
-1.10 |
-0.21 |
9.8 |
80 |
3 |
4 |
7 |
10 |
5 |
8 |
0 |
|
 |
19 |
 |
1.69 |
3.27 |
122.5 |
-0.99 |
-0.26 |
10.8 |
82 |
4 |
5 |
8 |
10 |
4 |
5 |
0 |
|
 |
20 |
 |
1.27 |
1.27 |
30.9 |
-1.13 |
-0.50 |
13.9 |
85 |
1 |
2 |
1 |
2 |
0 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |