spacer
spacer

PDBsum entry 1ulh

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 1ulh calculated with MOLE 2.0 PDB id
1ulh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.70 18.8 1.03 0.61 17.1 75 4 1 0 6 1 0 0  
2 1.29 1.76 20.8 0.74 0.27 16.0 77 2 2 0 6 0 1 0  
3 1.12 1.22 30.1 -1.59 -0.49 16.7 85 5 1 4 2 1 2 1  
4 1.47 1.90 18.7 -0.93 -0.28 4.3 77 0 1 3 0 3 0 0  
5 1.50 1.96 19.5 -1.17 -0.43 3.4 83 1 0 3 0 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer