PDBsum entry 1u5c Go to PDB code:  Tunnel analysis for: 1u5c calculated with MOLE 2.0 PDB id 1u5c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.36 17.2 0.59 0.21 5.6 87 1 0 2 5 0 1 0  NAD 336 A BIK 401 A 2 1.36 1.36 20.4 0.20 0.18 7.4 79 1 0 1 6 0 2 0  NAD 336 A BIK 401 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.