PDBsum entry 1u3e Go to PDB code:  Tunnel analysis for: 1u3e calculated with MOLE 2.0 PDB id 1u3e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.25 23.0 -0.34 -0.42 4.6 69 1 0 1 0 1 0 0  DT 6 A DA 8 A DG 9 A DC 10 A DG 28 C DC 29 C EDO 397 C 2 1.52 1.64 16.0 -1.72 -0.32 26.2 87 4 1 0 1 0 0 0  DG 7 B DT 8 B DG 9 B EDO 398 M Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.