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PDBsum entry 1u0c
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Tunnel analysis for: 1u0c calculated with  MOLE 2.0
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PDB id
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1u0c
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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11 tunnels,
coloured by tunnel radius |
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10 tunnels,
coloured by
tunnel radius
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10 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.33 |
1.33 |
17.8 |
-2.42 |
-0.17 |
26.5 |
81 |
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2 |
1 |
1 |
1 |
1 |
0 |
0 |
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DA 506 C DC 507 C DA 566 D DC 567 D
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2 |
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1.44 |
1.44 |
20.2 |
-1.13 |
0.04 |
13.6 |
88 |
1 |
0 |
1 |
2 |
1 |
0 |
0 |
DA 506 C DC 507 C DC 567 D
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3 |
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1.35 |
1.50 |
26.2 |
-0.35 |
-0.40 |
5.7 |
92 |
2 |
0 |
3 |
3 |
0 |
0 |
0 |
DT 503 C DA 504 C DA 505 C DA 506 C DC 507 C DC
567 D
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4 |
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1.36 |
1.62 |
26.7 |
-1.91 |
-0.71 |
11.2 |
96 |
1 |
0 |
6 |
1 |
0 |
0 |
0 |
DA 505 C DA 506 C DC 507 C DC 567 D DT 570 D DT
571 D
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5 |
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1.30 |
1.31 |
30.0 |
-0.61 |
-0.33 |
11.5 |
90 |
4 |
1 |
3 |
3 |
0 |
0 |
0 |
DT 503 C DA 504 C DA 505 C DA 506 C DC 507 C DA
566 D DC 567 D
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6 |
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1.32 |
1.33 |
31.9 |
-1.81 |
-0.58 |
14.8 |
93 |
3 |
1 |
6 |
1 |
0 |
0 |
0 |
DA 504 C DA 505 C DA 506 C DC 507 C DA 566 D DC
567 D DT 570 D DT 571 D
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7 |
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1.45 |
1.45 |
25.1 |
-1.99 |
-0.55 |
21.8 |
70 |
4 |
1 |
2 |
1 |
1 |
0 |
0 |
DA 514 C DG 515 C DA 516 C DT 561 D DC 562 D DA
563 D DC 564 D
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8 |
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1.41 |
1.41 |
31.7 |
-1.48 |
-0.43 |
21.3 |
65 |
3 |
2 |
0 |
2 |
1 |
0 |
0 |
DG 511 C DT 512 C DG 513 C DA 514 C DG 515 C DA
563 D DC 564 D DG 565 D
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9 |
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1.12 |
1.26 |
23.8 |
-0.69 |
-0.53 |
7.1 |
94 |
1 |
0 |
1 |
3 |
0 |
1 |
0 |
DC 517 C DA 518 C DG 519 C DT 520 C
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10 |
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1.30 |
1.51 |
16.9 |
-0.74 |
0.16 |
20.1 |
66 |
2 |
2 |
1 |
2 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program