PDBsum entry 1tyf Go to PDB code:  Pore analysis for: 1tyf calculated with MOLE 2.0 PDB id 1tyf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   24 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.90 54.1 -0.24 0.02 12.7 89 4 3 6 8 0 2 0   2 1.48 1.48 79.5 -0.42 -0.13 10.0 85 4 2 8 11 3 2 0   3 1.36 1.30 90.9 -0.50 -0.13 11.0 84 4 3 10 11 3 3 0   4 1.28 1.77 94.4 -0.86 -0.25 9.7 84 4 2 11 9 3 3 0   5 1.32 1.95 101.2 -0.97 -0.12 17.4 85 8 6 7 10 2 2 0   6 1.19 1.69 106.4 -0.93 -0.25 12.8 86 5 5 12 9 1 3 0   7 1.33 1.53 106.3 -1.29 -0.37 17.5 86 7 7 12 10 1 2 0   8 1.17 2.37 111.0 -1.77 -0.49 19.0 85 7 9 13 9 1 3 0   9 1.33 2.00 113.9 -1.27 -0.30 12.8 85 5 5 12 10 1 3 0   10 1.36 1.62 114.7 -1.47 -0.38 16.8 85 7 8 13 10 1 2 0   11 1.44 1.98 116.6 -1.59 -0.46 9.9 85 5 3 20 10 3 4 0   12 1.27 1.43 119.6 -1.80 -0.54 10.7 85 6 4 22 10 2 3 0   13 1.28 2.20 120.9 -1.61 -0.48 8.3 85 4 3 20 9 2 3 0   14 1.39 1.93 119.9 -1.06 -0.28 12.9 87 6 4 11 10 1 5 0   15 1.32 2.12 124.2 -2.01 -0.58 13.5 85 4 8 19 9 0 2 0   16 1.24 1.43 121.9 -1.85 -0.56 9.9 85 5 5 22 9 1 2 0   17 1.35 1.72 130.8 -1.52 -0.42 12.4 86 5 6 16 10 0 3 0   18 1.33 1.72 134.3 -1.91 -0.53 14.5 85 7 6 20 9 1 3 0   19 1.58 1.99 135.2 -1.75 -0.49 13.8 86 7 5 21 10 2 4 0   20 1.25 1.39 136.7 -2.06 -0.58 14.6 86 8 7 23 10 1 3 0   21 1.31 1.31 149.1 -1.25 -0.30 15.6 86 8 5 13 10 2 3 0   22 1.27 1.72 156.1 -1.92 -0.54 15.3 85 9 8 18 9 2 2 0   23 1.28 1.28 157.3 -2.00 -0.56 15.3 86 9 9 24 9 0 2 0   24 1.34 1.34 171.6 -2.15 -0.59 17.7 86 12 11 24 11 0 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.