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PDBsum entry 1tvr

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1tvr calculated with MOLE 2.0 PDB id
1tvr
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.47 25.2 -1.13 -0.37 9.1 84 2 1 4 1 1 2 0  
2 1.70 1.70 43.5 0.46 0.36 4.3 70 1 1 1 7 5 2 0  TB9 600 A
3 1.96 2.05 65.6 -1.32 -0.34 11.2 81 6 3 5 5 3 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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