PDBsum entry 1tkc Go to PDB code:  Tunnel analysis for: 1tkc calculated with MOLE 2.0 PDB id 1tkc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.41 1.41 25.6 0.15 0.15 9.1 67 1 2 0 1 2 2 0   2 1.18 1.37 19.0 -1.42 -0.54 4.2 89 1 0 3 5 1 0 0   3 1.17 1.38 21.1 -2.17 -0.71 8.3 90 1 1 3 2 1 0 0   4 1.29 1.38 16.0 1.77 0.33 2.6 85 0 1 0 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.