spacer
spacer

PDBsum entry 1tip

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1tip calculated with MOLE 2.0 PDB id
1tip
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.30 30.8 -1.72 -0.07 22.9 75 4 5 2 3 6 0 0  F6P 401 A
2 1.34 1.37 40.5 -1.29 -0.10 22.0 76 6 5 2 5 4 0 0  F6P 402 B
3 1.27 1.29 50.1 -1.41 -0.04 21.1 79 8 8 4 6 6 0 0  F6P 401 A F6P 402 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer