PDBsum entry 1th3 Go to PDB code:  Pore analysis for: 1th3 calculated with MOLE 2.0 PDB id 1th3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.67 3.18 47.5 -1.07 -0.40 13.6 85 4 4 7 6 1 2 0   2 1.46 1.68 75.0 -0.36 -0.28 10.3 84 3 6 7 7 4 5 0   3 1.44 1.67 78.3 -0.57 -0.21 11.2 82 5 5 8 8 5 4 0   4 2.33 2.47 35.6 -0.34 -0.19 13.4 88 7 1 1 7 0 2 0   5 2.20 2.20 30.1 -1.11 -0.21 23.4 81 2 4 1 1 1 0 0   6 2.28 2.39 42.7 -0.25 -0.13 13.5 85 7 2 2 6 1 2 0   7 2.29 2.40 46.0 -0.58 -0.23 14.8 86 8 2 2 5 0 3 0   8 2.29 2.38 54.7 -1.37 -0.39 22.1 85 8 4 3 4 0 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.