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PDBsum entry 1tae

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1tae calculated with MOLE 2.0 PDB id
1tae
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.28 3.31 25.1 -1.64 -0.48 26.7 81 2 2 1 1 1 0 0  
2 2.92 3.24 29.4 -2.59 -0.53 31.6 87 5 3 0 2 0 0 0  SO4 410 C
3 1.90 1.90 33.5 -1.72 -0.30 18.8 83 5 2 3 1 3 0 0  NAD 401 A SO4 409 A
4 1.83 2.65 39.2 -1.46 -0.16 20.7 73 4 7 1 2 5 2 0  NAD 402 B SO4 412 B
5 2.00 2.17 42.1 -1.13 -0.02 16.6 74 7 4 2 3 7 0 0  NAD 402 B
6 1.90 1.90 48.5 -1.10 -0.09 16.7 76 7 5 3 3 6 0 0  NAD 401 A SO4 409 A
7 1.45 1.50 49.5 -0.32 0.03 9.9 78 5 3 2 5 4 1 0  NAD 403 C
8 1.80 2.97 39.1 -2.44 -0.41 24.7 81 5 7 4 0 3 1 0  NAD 404 D NA 532 D
9 1.79 2.96 39.6 -1.58 -0.12 21.9 74 4 7 1 3 5 1 0  NAD 404 D SO4 425 D NA 532 D
10 1.87 1.98 45.5 -1.32 -0.11 17.2 76 8 2 3 2 6 0 0  NAD 404 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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