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PDBsum entry 1suo

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Tunnel analysis for: 1suo calculated with MOLE 2.0 PDB id
1suo
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.31 47.1 1.40 0.38 8.2 87 3 1 1 13 3 0 1  HEM 500 A CPZ 600 A
2 1.45 1.88 15.0 -1.13 -0.08 3.0 74 1 0 2 2 1 2 0  
3 1.66 1.68 18.9 -1.74 -0.32 11.3 80 3 1 2 1 1 2 0  
4 1.43 1.88 19.4 -1.44 -0.18 10.3 77 3 1 2 2 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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