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PDBsum entry 1ss4
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Pore analysis for: 1ss4 calculated with MOLE 2.0
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PDB id
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1ss4
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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0 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.40 |
29.1 |
-1.01 |
0.05 |
17.1 |
76 |
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2 |
4 |
1 |
4 |
3 |
0 |
0 |
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MSE 59 A ACT 411 A
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2 |
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1.40 |
1.40 |
37.2 |
-0.59 |
-0.30 |
8.6 |
82 |
3 |
2 |
3 |
6 |
4 |
0 |
0 |
MSE 9 A MSE 97 A CIT 431 A MSE 9 B FMT 404 B GSH 432 B
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3 |
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1.57 |
1.65 |
44.4 |
-1.38 |
-0.60 |
17.0 |
86 |
6 |
1 |
2 |
2 |
0 |
1 |
0 |
MSE 9 A MSE 9 B
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4 |
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1.26 |
1.42 |
67.3 |
-0.16 |
-0.05 |
7.8 |
81 |
2 |
4 |
5 |
13 |
8 |
0 |
0 |
MSE 9 A MSE 97 A ACT 411 A CIT 431 A MSE 9 B MSE 97 B FMT 404 B GSH 432 B
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5 |
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1.27 |
1.41 |
73.9 |
-0.73 |
-0.28 |
12.8 |
82 |
5 |
3 |
4 |
8 |
4 |
1 |
0 |
MSE 9 A ACT 411 A MSE 9 B MSE 97 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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