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PDBsum entry 1ss4

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1ss4 calculated with MOLE 2.0 PDB id
1ss4
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.40 29.1 -1.01 0.05 17.1 76 2 4 1 4 3 0 0  MSE 59 A ACT 411 A
2 1.40 1.40 37.2 -0.59 -0.30 8.6 82 3 2 3 6 4 0 0  MSE 9 A MSE 97 A CIT 431 A MSE 9 B FMT 404 B GSH
432 B
3 1.57 1.65 44.4 -1.38 -0.60 17.0 86 6 1 2 2 0 1 0  MSE 9 A MSE 9 B
4 1.26 1.42 67.3 -0.16 -0.05 7.8 81 2 4 5 13 8 0 0  MSE 9 A MSE 97 A ACT 411 A CIT 431 A MSE 9 B MSE
97 B FMT 404 B GSH 432 B
5 1.27 1.41 73.9 -0.73 -0.28 12.8 82 5 3 4 8 4 1 0  MSE 9 A ACT 411 A MSE 9 B MSE 97 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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