PDBsum entry 1spi Go to PDB code:  Pore analysis for: 1spi calculated with MOLE 2.0 PDB id 1spi Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.08 1.49 28.4 0.13 0.05 6.5 87 1 1 1 7 1 1 1   2 1.79 1.79 64.8 -0.85 -0.07 19.9 80 6 2 4 6 1 2 0   3 1.30 2.25 71.2 -1.39 -0.18 18.3 85 7 3 6 4 2 3 0   4 1.53 1.98 84.2 -0.53 -0.15 10.2 85 5 2 6 14 3 2 0   5 1.66 1.89 84.7 -1.76 -0.29 22.6 80 10 5 4 4 4 2 0   6 2.20 3.28 98.2 -1.36 -0.33 20.1 83 8 4 4 8 3 1 0   7 1.29 1.96 108.4 -1.46 -0.35 19.0 87 9 3 9 8 3 2 0   8 1.76 1.77 108.6 -1.13 -0.19 21.4 82 9 6 7 8 2 2 0   9 1.65 1.90 116.2 -1.26 -0.30 20.2 86 12 4 6 10 4 1 0   10 1.51 1.94 125.3 -0.67 -0.19 12.8 85 7 5 9 17 4 2 0   11 1.52 2.00 124.4 -0.96 -0.31 16.4 85 10 2 6 14 4 2 0   12 1.37 1.84 131.9 -0.71 -0.12 11.4 82 10 4 7 15 4 3 0   13 1.55 1.91 172.0 -1.04 -0.26 16.7 83 15 4 7 15 5 3 0   14 1.55 2.32 182.6 -0.67 -0.07 12.3 82 14 4 11 20 6 4 0   15 1.36 1.83 189.3 -1.31 -0.38 19.8 81 10 11 8 11 6 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.