PDBsum entry 1sdr Go to PDB code:  Tunnel analysis for: 1sdr calculated with MOLE 2.0 PDB id 1sdr Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 2.47 10.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  19 U B,31 G C,32 G C,33 U C,35 A C,37 A D,38 U D 2 2.49 16.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  19 U B,20 C B,21 C B,30 A C,31 G C,32 G C,33 U C, 37 A D,38 U D 3 1.76 19.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  27 A C,28 G C,29 G C,30 A C,31 G C,32 G C,33 U C, 38 U D,39 C D,40 A D,41 C D 4 1.72 24.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  26 A C,27 A C,29 G C,30 A C,31 G C,32 G C,33 U C, 38 U D,39 C D,40 A D,41 C D,42 C D,43 U D 5 1.59 11.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  5 G A,6 A A,7 G A,21 C B,29 G C,30 A C,44 C D,45 C D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.