spacer
spacer

PDBsum entry 1sa0

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1sa0 calculated with MOLE 2.0 PDB id
1sa0
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.33 2.33 25.1 -0.31 -0.30 9.3 88 1 2 3 3 0 1 0  
2 2.34 2.35 25.5 -0.67 -0.39 6.4 86 0 1 4 3 1 1 0  
3 1.41 1.48 27.8 -1.02 -0.25 17.3 83 3 4 0 3 1 0 0  
4 1.77 2.91 28.5 -1.34 -0.58 10.4 89 2 2 5 2 1 0 0  
5 1.40 1.48 37.6 -1.24 -0.17 20.7 82 6 4 0 5 1 0 0  
6 1.70 2.81 44.6 0.22 0.01 9.7 78 5 1 2 3 4 0 0  
7 2.17 2.18 50.7 -0.89 -0.57 13.4 89 1 5 4 5 0 0 0  
8 1.57 2.33 53.1 -0.39 0.08 13.4 78 4 1 1 3 6 0 0  
9 2.16 2.16 66.9 -1.89 -0.27 28.1 79 7 6 1 3 1 3 0  
10 1.20 1.80 125.4 -0.33 -0.27 14.0 84 4 7 3 12 1 1 0  
11 2.04 2.03 177.5 -1.67 -0.48 22.8 80 15 20 6 8 6 3 0  
12 1.48 1.92 192.7 -1.27 -0.40 20.9 81 13 10 5 10 5 2 0  
13 1.34 1.71 195.9 -1.25 -0.27 21.3 79 18 17 5 14 8 4 0  
14 1.51 1.48 215.9 -2.24 -0.46 32.3 78 23 24 2 10 3 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer