PDBsum entry 1s5t Go to PDB code:  Tunnel analysis for: 1s5t calculated with MOLE 2.0 PDB id 1s5t Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.32 23.7 -0.30 -0.36 5.3 82 2 0 1 3 2 0 0   2 1.42 2.40 27.1 -0.07 -0.23 9.0 86 2 1 2 4 2 1 0   3 1.41 2.39 21.7 0.15 -0.16 9.1 92 2 0 2 4 1 0 0   4 1.37 1.62 22.0 -0.10 -0.14 6.3 81 2 0 1 4 2 0 0   5 1.38 1.63 27.7 -0.33 -0.14 8.4 85 2 1 2 6 2 0 0   6 1.38 2.22 32.3 0.11 -0.18 8.5 90 2 1 3 4 1 1 0   7 1.27 1.56 15.2 -0.10 -0.30 8.3 75 2 0 0 2 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.