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PDBsum entry 1s5l
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Photosynthesis
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PDB id
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1s5l
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Contents |
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333 a.a.
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476 a.a.
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421 a.a.
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339 a.a.
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76 a.a.
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33 a.a.
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53 a.a.
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38 a.a.
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38 a.a.
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37 a.a.
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37 a.a.
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30 a.a.
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246 a.a.
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31 a.a.
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105 a.a.
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137 a.a.
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40 a.a.
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37 a.a.
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58 a.a.
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×2
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×72
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×4
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×4
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×2
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×14
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×2
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×4
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Generate full PROCHECK analyses
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PROCHECK summary for 1s5l
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 3472 80.4%*
Additional allowed regions [a,b,l,p] 797 18.4%
Generously allowed regions [~a,~b,~l,~p] 47 1.1%
Disallowed regions [XX] 4 0.1%*
---- ------
Non-glycine and non-proline residues 4320 100.0%
End-residues (excl. Gly and Pro) 70
Glycine residues 480
Proline residues 260
----
Total number of residues 5130
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.62*
Chi1-chi2 distribution -0.51*
Chi1 only -0.08
Chi3 & chi4 0.53
Omega 0.52
-0.09
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.52
Main-chain bond angles 0.16
0.31
=====
OVERALL AVERAGE 0.08
=====
G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
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