PDBsum entry 1s2c Go to PDB code:  Tunnel analysis for: 1s2c calculated with MOLE 2.0 PDB id 1s2c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.80 3.19 17.6 -0.41 0.55 11.9 69 3 0 4 2 5 0 0  NAP 1001 A FLF 2001 A DMS 2003 A 2 1.20 1.37 22.6 -0.41 0.35 5.8 78 2 1 4 2 5 0 0  NAP 1001 A FLF 2001 A 3 1.84 3.01 24.1 -1.87 -0.18 14.0 75 4 0 4 1 4 0 0  NAP 1001 A FLF 2001 A 4 1.27 1.49 32.6 -1.77 -0.03 14.6 80 4 0 6 1 5 1 0  NAP 1001 A FLF 2001 A 5 1.26 1.49 40.1 -1.95 -0.18 13.3 82 5 0 6 1 4 1 0  NAP 1001 A FLF 2001 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.