 |
PDBsum entry 1s2a
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1s2a calculated with MOLE 2.0
|
PDB id
|
|
|
|
1s2a
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
0 pores,
coloured by radius |
 |
5 pores,
coloured by radius
|
5 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.89 |
3.98 |
31.8 |
-1.06 |
0.34 |
11.2 |
65 |
 |
4 |
0 |
3 |
4 |
6 |
0 |
0 |
 |
NAP 1001 A IMN 2001 A UNX 2003 A
|
 |
 |
2 |
 |
1.23 |
1.78 |
37.9 |
-1.33 |
0.08 |
11.7 |
76 |
4 |
0 |
5 |
3 |
4 |
1 |
0 |
IMN 2001 A DMS 2002 A
|
 |
3 |
 |
1.22 |
1.69 |
39.3 |
-1.79 |
0.10 |
12.4 |
75 |
5 |
0 |
5 |
1 |
6 |
1 |
0 |
NAP 1001 A IMN 2001 A DMS 2002 A UNX 2003 A
|
 |
4 |
 |
1.23 |
1.67 |
40.1 |
-0.85 |
0.27 |
8.4 |
72 |
3 |
0 |
4 |
3 |
5 |
1 |
0 |
IMN 2001 A DMS 2002 A
|
 |
5 |
 |
1.25 |
1.66 |
48.8 |
-1.59 |
0.08 |
12.0 |
70 |
5 |
0 |
4 |
3 |
7 |
1 |
0 |
NAP 1001 A IMN 2001 A DMS 2002 A UNX 2003 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |