spacer
spacer

PDBsum entry 1rtc

Go to PDB code: 
Top Page protein links
Glycosidase PDB id
1rtc
Contents
Protein chain
268 a.a.
Waters ×48

References listed in PDB file
Key reference
Title Structure of recombinant ricin a chain at 2.3 a.
Authors D.Mlsna, A.F.Monzingo, B.J.Katzin, S.Ernst, J.D.Robertus.
Ref. Protein Sci, 1993, 2, 429-435. [DOI no: 10.1002/pro.5560020315]
PubMed id 8453380
Abstract
The plant cytotoxin ricin is a heterodimer with a cell surface binding (B) chain and an enzymatically active A chain (RTA) known to act as a specific N-glycosidase. RTA must be separated from B chain to attack rRNA. The X-ray structure of ricin has been solved recently; here we report the structure of the isolated A chain expressed from a clone in Escherichia coli. This structure of wild-type rRTA has and will continue to serve as the parent compound for difference Fouriers used to assess the structure of site-directed mutants designed to analyze the mechanism of this medically and commercially important toxin. The structure of the recombinant protein, rRTA, is virtually identical to that seen previously for A chain in the heterodimeric toxin. Some minor conformational changes due to interactions with B chain and to crystal packing differences are described. Perhaps the most significant difference is the presence in rRTA of an additional active site water. This molecule is positioned to act as the ultimate nucleophile in the depurination reaction mechanism proposed by Monzingo and Robertus (1992, J. Mol. Biol. 227, 1136-1145).
Figure 2.
Fig. 2. Superposition of the refined models of ricin Aand rRTA. Recom- binant RTA, as refinedin this study is shown in the heavy ondsasa Ca trace. The refined ricin A chain (Ru- tenber et al., 1991) is shown in thin bonds.
Figure 5.
Fig. 5. The active site of ricin. The conforma- of ricin A is shown in light bonds and that f rRTA n heavy bonds.
The above figures are reprinted from an Open Access publication published by the Protein Society: Protein Sci (1993, 2, 429-435) copyright 1993.
Secondary reference #1
Title Structure of ricin a-Chain at 2.5 a.
Authors B.J.Katzin, E.J.Collins, J.D.Robertus.
Ref. Proteins, 1991, 10, 251-259.
PubMed id 1881881
Abstract
Secondary reference #2
Title Crystallization of ricin a chain obtained from a cloned gene expressed in escherichia coli.
Authors J.D.Robertus, M.Piatak, R.Ferris, L.L.Houston.
Ref. J Biol Chem, 1987, 262, 19-20.
PubMed id 3539930
Abstract
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer