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PDBsum entry 1ro5

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Tunnel analysis for: 1ro5 calculated with MOLE 2.0 PDB id
1ro5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.64 2.03 18.7 0.10 0.18 11.2 79 2 2 1 3 4 0 0  SO4 404 A
2 1.32 3.96 20.0 2.00 0.68 1.8 80 0 1 0 10 1 0 0  
3 1.32 3.56 22.2 1.88 0.90 4.0 77 1 1 0 7 3 0 0  SO4 404 A
4 1.19 1.88 23.0 2.14 0.69 1.6 81 0 1 0 10 1 0 0  
5 1.17 1.80 25.1 2.08 0.88 3.3 79 1 1 0 7 3 0 0  SO4 404 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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