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PDBsum entry 1rl3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1rl3 calculated with MOLE 2.0 PDB id
1rl3
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 2.01 57.9 -1.21 -0.38 14.8 84 4 3 5 4 2 1 0  
2 2.21 2.24 138.5 -0.99 -0.39 16.1 80 2 6 3 7 4 1 0  GOL 402 A
3 1.26 1.32 29.3 -0.94 -0.27 14.5 76 3 4 1 2 3 1 0  
4 1.26 1.32 30.5 -1.90 -0.39 23.6 78 5 3 2 2 3 1 0  
5 1.31 2.21 31.2 0.38 0.09 7.2 79 1 3 0 7 3 1 0  PCG 801 B
6 1.83 2.01 31.5 -1.51 -0.46 16.9 81 3 4 2 3 1 2 0  
7 2.14 2.14 27.0 0.53 0.05 11.3 87 2 1 0 5 1 0 0  GOL 802 B
8 2.14 2.14 46.2 -0.09 -0.18 10.8 88 1 3 4 7 2 0 0  GOL 802 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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