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PDBsum entry 1rfu
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Pore analysis for: 1rfu calculated with MOLE 2.0
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PDB id
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1rfu
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.40 |
1.40 |
87.3 |
-1.36 |
-0.41 |
20.9 |
81 |
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7 |
8 |
5 |
6 |
0 |
2 |
0 |
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2 |
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1.73 |
1.84 |
117.3 |
-0.71 |
-0.20 |
17.2 |
80 |
12 |
7 |
5 |
9 |
3 |
1 |
0 |
ADP 3402 D
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3 |
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1.71 |
1.77 |
117.5 |
-1.37 |
-0.39 |
18.0 |
82 |
11 |
8 |
8 |
7 |
1 |
3 |
0 |
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4 |
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1.40 |
1.39 |
133.4 |
-0.58 |
-0.24 |
14.3 |
80 |
12 |
6 |
7 |
12 |
3 |
3 |
0 |
ADP 3402 D
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5 |
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1.55 |
1.72 |
130.2 |
-0.52 |
-0.14 |
15.1 |
84 |
9 |
5 |
6 |
7 |
2 |
2 |
0 |
ADP 3402 D
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6 |
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1.77 |
1.82 |
137.2 |
-1.83 |
-0.43 |
22.6 |
84 |
12 |
12 |
13 |
7 |
1 |
2 |
0 |
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7 |
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2.83 |
3.14 |
155.4 |
-1.86 |
-0.50 |
22.2 |
82 |
10 |
8 |
9 |
5 |
1 |
3 |
0 |
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8 |
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1.74 |
1.82 |
161.7 |
-0.63 |
-0.23 |
13.0 |
81 |
15 |
6 |
12 |
12 |
4 |
4 |
0 |
ADP 3402 D
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9 |
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1.41 |
1.41 |
163.4 |
-1.27 |
-0.43 |
16.6 |
83 |
10 |
7 |
11 |
7 |
1 |
4 |
0 |
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10 |
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1.81 |
1.83 |
193.6 |
-1.32 |
-0.43 |
15.7 |
83 |
14 |
7 |
14 |
8 |
2 |
5 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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