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PDBsum entry 1r8h

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1r8h calculated with MOLE 2.0 PDB id
1r8h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 1.83 16.6 -1.74 -0.14 16.4 66 3 0 0 0 1 4 1  PO4 508 A
2 1.72 1.76 20.1 -1.10 -0.18 18.4 70 3 2 0 0 2 1 2  
3 1.46 1.68 15.2 -1.10 -0.05 10.7 68 2 0 0 1 0 4 3  
4 1.25 1.34 17.0 -1.51 0.00 22.3 69 4 0 0 2 1 3 0  PO4 511 B
5 1.46 1.69 23.9 -0.65 -0.15 12.3 71 3 2 0 1 1 2 4  
6 1.25 1.31 26.5 -1.16 -0.15 21.9 72 4 2 0 2 2 1 2  PO4 511 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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