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PDBsum entry 1r56

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1r56 calculated with MOLE 2.0 PDB id
1r56
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 2.57 124.9 -0.56 -0.06 14.5 83 8 6 7 12 4 1 0  
2 1.29 2.84 127.7 -0.45 -0.13 14.3 84 10 8 10 14 6 1 0  
3 1.31 2.88 132.2 -0.45 -0.11 18.5 82 11 10 5 15 6 0 0  
4 1.16 1.33 19.8 -1.50 -0.73 16.4 71 1 2 2 0 2 0 0  
5 1.19 2.19 17.1 0.07 -0.20 1.7 86 0 0 1 5 1 0 0  
6 1.16 1.75 22.1 -1.49 -0.68 19.1 82 1 1 1 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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