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PDBsum entry 1qzr

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1qzr calculated with MOLE 2.0 PDB id
1qzr
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 4.19 4.19 36.3 -1.14 -0.20 15.1 87 2 2 9 5 2 0 0  
2 1.39 1.57 38.9 -1.75 -0.70 11.5 92 1 5 10 4 0 1 0  
3 1.26 1.25 64.7 -1.57 -0.52 15.8 89 8 5 8 6 1 1 0  ANP 903 B MG 905 B
4 1.20 1.49 82.3 -1.70 -0.48 14.7 86 10 5 10 6 4 1 0  CDX 901 B ANP 903 B MG 905 B
5 1.17 1.14 84.9 -1.30 -0.39 15.7 87 8 6 15 8 3 0 0  ANP 902 A MG 904 A
6 1.17 1.15 125.0 -1.80 -0.55 22.1 86 11 9 10 6 1 0 0  ANP 902 A MG 904 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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