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PDBsum entry 1qwm

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1qwm calculated with MOLE 2.0 PDB id
1qwm
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.50 2.60 94.5 -0.34 0.11 11.9 81 6 5 4 10 5 3 0  FMT 1730 A FMT 1736 B
2 1.40 3.16 110.3 -0.36 0.22 9.4 79 7 4 5 12 11 4 0  FMT 1715 A FMT 1730 A FMT 1735 A HEM 550 B FMT
1702 B FMT 1703 B FMT 1705 B FMT 1707 B FMT 1708 B
3 1.39 3.30 150.0 -0.56 -0.02 13.6 77 10 4 6 12 8 4 0  HEM 550 B FMT 1702 B FMT 1703 B FMT 1705 B FMT
1707 B FMT 1708 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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