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PDBsum entry 1qw4

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Pore analysis for: 1qw4 calculated with MOLE 2.0 PDB id
1qw4
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.59 5.03 26.3 -0.89 0.07 8.3 74 2 1 3 2 2 2 0  
2 1.90 2.20 56.4 -0.78 -0.03 11.5 77 2 3 8 6 5 0 1  HEM 900 B 3AR 904 B
3 1.18 1.36 72.5 -1.67 -0.59 18.6 84 5 3 3 2 0 2 0  
4 1.16 1.35 132.2 -1.00 -0.13 16.8 79 7 6 6 6 3 2 2  HEM 900 B H4B 903 B 3AR 904 B ZN 950 B
5 1.17 1.38 140.4 -0.54 -0.09 13.4 76 5 5 6 8 5 2 3  HEM 900 B H4B 903 B 3AR 904 B ZN 950 B
6 2.31 2.41 152.4 -1.00 -0.05 17.2 76 9 7 8 7 7 1 2  HEM 900 B H4B 903 B 3AR 904 B ZN 950 B
7 1.86 2.06 160.6 -0.62 -0.02 14.3 73 7 6 7 9 9 1 3  HEM 900 B H4B 903 B 3AR 904 B ZN 950 B
8 1.87 1.90 154.8 -0.22 0.03 10.3 76 4 4 8 10 10 1 3  HEM 900 A H4B 901 A 3AR 902 A ZN 950 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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