PDBsum entry 1qqw Go to PDB code:  Pore analysis for: 1qqw calculated with MOLE 2.0 PDB id 1qqw Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.21 2.24 45.2 -0.11 -0.19 11.2 87 6 3 3 7 0 2 0   2 1.48 2.72 47.3 -0.96 -0.37 15.7 83 4 3 5 6 1 2 0   3 1.17 2.30 58.8 -1.44 -0.48 19.0 79 4 4 3 6 3 2 0   4 1.62 2.62 70.6 -0.43 -0.15 12.1 85 5 4 7 8 3 3 0   5 1.44 1.69 76.7 -0.18 -0.27 9.6 85 2 6 7 9 3 4 0   6 1.13 2.31 82.0 -0.28 -0.12 10.5 84 3 7 7 9 5 4 0   7 1.52 3.05 83.7 -0.84 -0.33 14.4 84 6 6 7 9 3 3 0   8 1.50 3.35 100.4 -0.45 -0.17 10.1 79 4 4 6 7 5 4 2   9 1.40 2.58 111.6 -1.02 -0.17 14.7 77 8 4 7 7 6 3 2   10 1.46 2.54 115.2 -1.29 -0.31 16.2 80 6 5 8 6 3 3 2   11 1.18 2.31 154.6 -0.73 -0.11 13.6 80 7 7 11 10 8 4 2   12 2.16 2.27 36.4 -0.11 -0.22 9.1 91 5 2 5 6 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.