PDBsum entry 1qqd Go to PDB code:  Pore analysis for: 1qqd calculated with MOLE 2.0 PDB id 1qqd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.25 3.79 25.9 -1.29 -0.23 10.3 81 2 4 4 1 4 1 0   2 1.85 2.59 36.6 -1.95 -0.77 24.8 85 3 7 2 2 1 1 0   3 1.87 2.59 41.1 -1.65 -0.52 18.8 80 2 6 4 2 5 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.