PDBsum entry 1qnh Go to PDB code:  Tunnel analysis for: 1qnh calculated with MOLE 2.0 PDB id 1qnh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.24 17.8 -1.57 -0.52 21.3 79 2 2 2 1 1 0 0   2 1.24 1.24 17.9 -1.48 -0.67 20.9 89 2 2 2 1 0 0 0   3 1.34 1.65 20.4 -1.37 -0.43 18.0 85 4 2 2 2 0 1 0   4 1.52 1.52 22.7 -1.77 -0.57 26.3 87 3 3 2 2 0 1 0   5 1.47 2.03 15.7 -1.31 -0.42 16.4 84 3 0 2 2 0 0 0  MLE 203 C MVA 204 C BMT 205 C MLE 208 C MLE 210 C 6 1.49 2.09 16.3 -0.39 -0.24 10.2 89 2 0 2 3 0 0 0  MLE 203 C MVA 204 C BMT 205 C ABA 206 C SAR 207 C 7 1.29 1.29 16.1 -1.37 -0.33 18.8 86 2 0 2 2 0 0 0  MLE 203 D MVA 204 D BMT 205 D MLE 208 D MLE 210 D 8 1.29 1.29 16.7 -1.29 -0.42 16.6 86 2 0 2 2 0 0 0  MLE 203 D MVA 204 D BMT 205 D MLE 208 D MLE 210 D 9 1.28 1.28 18.4 -0.21 -0.24 9.0 89 2 0 2 3 0 0 0  MLE 203 D MVA 204 D BMT 205 D ABA 206 D SAR 207 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.