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PDBsum entry 1qk3
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Tunnel analysis for: 1qk3 calculated with  MOLE 2.0
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PDB id
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1qk3
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
3.36 |
52.7 |
0.02 |
0.01 |
16.1 |
75 |
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4 |
4 |
1 |
10 |
1 |
3 |
2 |
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2 |
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1.22 |
3.33 |
55.1 |
0.38 |
0.19 |
13.9 |
73 |
5 |
5 |
1 |
10 |
2 |
2 |
2 |
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3 |
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1.26 |
3.37 |
58.8 |
0.15 |
0.09 |
16.4 |
79 |
3 |
5 |
2 |
12 |
3 |
0 |
2 |
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4 |
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1.26 |
3.37 |
63.6 |
-0.48 |
-0.06 |
20.2 |
78 |
5 |
8 |
2 |
11 |
3 |
0 |
2 |
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5 |
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1.23 |
3.36 |
67.8 |
-0.23 |
-0.06 |
17.9 |
78 |
6 |
7 |
1 |
12 |
3 |
0 |
2 |
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6 |
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1.27 |
3.41 |
69.4 |
-0.17 |
0.09 |
16.3 |
74 |
5 |
6 |
1 |
10 |
4 |
2 |
2 |
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7 |
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1.23 |
3.27 |
75.1 |
-0.13 |
0.00 |
19.0 |
78 |
4 |
7 |
3 |
14 |
4 |
0 |
2 |
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8 |
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1.21 |
3.19 |
83.8 |
-0.48 |
-0.06 |
18.4 |
77 |
7 |
7 |
2 |
13 |
3 |
3 |
2 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program