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PDBsum entry 1q5e
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Pore analysis for: 1q5e calculated with  MOLE 2.0
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PDB id
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1q5e
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.09 |
1.83 |
39.3 |
1.99 |
0.52 |
2.8 |
74 |
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1 |
1 |
1 |
11 |
3 |
1 |
0 |
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2 |
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1.23 |
1.19 |
48.1 |
-1.08 |
-0.28 |
16.6 |
77 |
4 |
4 |
1 |
5 |
2 |
3 |
0 |
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3 |
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1.21 |
2.78 |
68.3 |
1.49 |
0.51 |
5.3 |
72 |
3 |
2 |
0 |
15 |
5 |
1 |
0 |
HEM 440 A
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4 |
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1.23 |
1.61 |
87.2 |
-0.60 |
0.05 |
17.1 |
81 |
7 |
3 |
4 |
15 |
4 |
1 |
0 |
HEM 440 A
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5 |
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1.14 |
1.63 |
94.6 |
0.26 |
0.25 |
13.7 |
79 |
6 |
4 |
4 |
16 |
4 |
1 |
0 |
HEM 440 A
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6 |
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1.42 |
1.81 |
138.9 |
-1.50 |
-0.52 |
19.1 |
84 |
5 |
7 |
5 |
6 |
1 |
4 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program