PDBsum entry 1pyt Go to PDB code:  Pore analysis for: 1pyt calculated with MOLE 2.0 PDB id 1pyt Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.70 26.4 -0.47 -0.26 8.8 79 2 0 2 3 3 1 1   2 2.19 2.86 67.5 -1.16 -0.38 18.8 86 6 8 5 8 2 0 0   3 1.70 1.79 74.4 -1.17 -0.36 16.2 83 4 7 4 2 3 2 0   4 1.22 1.22 74.7 -1.00 -0.48 12.0 87 2 8 5 10 2 2 0   5 1.20 3.12 76.6 -0.05 -0.23 5.2 82 2 2 8 13 3 0 2   6 1.48 1.51 81.8 -1.09 -0.43 15.3 86 5 6 6 5 1 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.