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PDBsum entry 1py3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1py3 calculated with MOLE 2.0 PDB id
1py3
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.43 38.7 -1.84 -0.27 25.5 82 8 3 2 0 2 1 0  
2 1.24 1.29 114.4 -0.81 -0.31 11.5 83 5 2 5 4 2 3 0  
3 1.19 1.23 120.5 -1.31 -0.36 16.8 83 7 3 5 5 2 3 0  
4 1.20 1.44 136.6 -2.06 -0.49 24.7 83 7 5 4 2 2 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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