PDBsum entry 1pvh Go to PDB code:  Tunnel analysis for: 1pvh calculated with MOLE 2.0 PDB id 1pvh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 3.05 19.5 -0.10 0.55 8.9 79 1 2 1 4 3 1 0   2 1.54 1.63 19.5 -0.05 -0.27 4.3 91 1 1 4 3 1 0 0   3 1.55 1.63 19.7 -0.07 -0.15 6.1 94 1 0 5 4 1 0 0   4 1.52 1.53 26.5 -0.28 -0.07 8.7 90 2 1 5 5 1 1 0   5 1.33 1.43 21.2 0.20 0.09 8.2 76 0 1 2 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.