PDBsum entry 1pv4 Go to PDB code:  Pore analysis for: 1pv4 calculated with MOLE 2.0 PDB id 1pv4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.97 3.18 44.0 -1.81 -0.48 22.7 79 6 3 3 4 1 1 0  MSE 29 D 2 1.43 1.44 82.5 -1.65 -0.44 21.8 81 7 5 4 6 2 0 0  MSE 205 D MSE 245 D MSE 29 E 3 1.81 2.26 103.2 -2.39 -0.52 23.4 86 8 5 4 3 0 1 0   4 1.41 2.03 111.1 -1.62 -0.42 23.3 77 10 8 5 6 3 1 0  MSE 380 D MSE 186 E 5 2.04 3.37 114.6 -1.66 -0.35 21.7 83 12 7 7 6 1 3 0  DC 4 K 6 1.21 1.47 120.0 -1.23 -0.39 19.9 86 13 9 6 11 0 2 0  MSE 327 E MSE 327 F DC 4 K 7 1.33 1.33 132.5 -1.26 -0.43 18.7 83 8 6 6 9 3 0 0  MSE 205 B MSE 245 B 8 1.76 2.30 135.4 -2.10 -0.46 23.9 81 15 8 6 3 3 0 0  MSE 186 B 9 1.29 2.19 151.8 -0.76 -0.24 16.7 83 13 8 8 15 2 1 0  MSE 186 B MSE 327 F 10 1.30 1.32 156.6 -1.98 -0.56 25.3 83 16 15 7 7 4 2 0  MSE 205 A MSE 245 A MSE 186 B MSE 327 B 11 1.29 2.10 166.1 -1.10 -0.39 19.5 81 14 8 7 14 1 1 0  MSE 186 D MSE 327 D MSE 327 F 12 1.20 1.42 167.5 -0.81 -0.35 17.6 85 13 9 6 19 1 2 0  MSE 205 B MSE 245 B MSE 327 C MSE 327 F 13 1.57 1.97 165.3 -1.86 -0.47 24.9 79 14 11 4 6 1 2 0  MSE 380 D 14 1.55 2.15 175.9 -2.08 -0.53 28.3 75 22 14 2 6 3 0 0  MSE 186 B MSE 380 D 15 1.80 1.94 173.9 -1.78 -0.44 22.0 83 15 10 8 8 0 4 0  MSE 29 E MSE 327 E DC 4 K 16 1.44 1.45 175.2 -1.71 -0.47 24.5 81 18 13 6 12 3 2 0  MSE 186 B MSE 205 B MSE 245 B MSE 327 C 17 1.46 1.52 180.9 -1.46 -0.42 21.3 81 21 12 9 14 2 3 0  MSE 380 C MSE 327 D MSE 327 E 18 1.75 1.89 184.4 -2.07 -0.50 26.7 79 23 13 6 8 2 2 0  MSE 186 B MSE 29 E MSE 327 E 19 1.38 1.38 193.6 -1.87 -0.54 25.2 81 20 13 5 11 2 2 0  MSE 205 B MSE 245 B MSE 327 C MSE 380 D 20 1.29 1.95 198.0 -1.01 -0.39 18.1 84 14 12 8 19 2 2 0  MSE 205 A MSE 245 A MSE 327 B MSE 327 F 21 1.53 1.80 201.2 -1.80 -0.49 25.0 77 21 12 7 8 3 1 0  MSE 186 B MSE 186 D MSE 327 D 22 1.31 1.30 209.8 -1.54 -0.50 21.3 85 17 15 10 17 3 4 0  MSE 205 A MSE 245 A MSE 205 B MSE 245 B MSE 327 B MSE 327 C 23 1.24 1.34 224.0 -1.74 -0.54 23.5 81 21 16 7 12 3 2 0  MSE 205 A MSE 245 A MSE 327 B MSE 380 D 24 1.24 1.34 232.6 -1.74 -0.51 22.4 84 22 15 11 14 2 4 0  MSE 205 A MSE 245 A MSE 327 B MSE 29 E MSE 327 E DC 4 K 25 1.27 1.42 226.7 -1.34 -0.42 20.2 85 20 13 12 19 2 4 0  MSE 205 B MSE 245 B MSE 327 C MSE 327 E 26 1.40 1.44 235.9 -1.61 -0.53 21.4 82 20 14 11 14 3 3 0  MSE 205 A MSE 245 A MSE 327 B MSE 186 D MSE 327 D 27 1.39 1.71 244.3 -1.92 -0.53 23.6 86 20 17 11 10 3 2 0  MSE 205 A MSE 245 A MSE 327 B 28 1.51 1.80 249.7 -1.51 -0.44 19.2 80 18 8 11 11 2 2 0  MSE 186 D MSE 327 D 29 1.54 1.58 249.5 -1.76 -0.47 23.5 84 22 15 9 15 2 2 0  MSE 205 B MSE 245 B MSE 327 C 30 1.28 1.32 257.2 -1.37 -0.44 20.1 84 21 16 14 19 3 4 0  MSE 205 A MSE 245 A MSE 327 B MSE 327 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.