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PDBsum entry 1po6

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Top Page protein dna_rna tunnels links
Tunnel analysis for: 1po6 calculated with MOLE 2.0 PDB id
1po6
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 0.99 2.72 19.8 -2.27 -0.41 34.6 84 5 2 0 2 0 1 0  DA 203 B
2 1.50 1.84 23.7 -0.62 -0.05 23.2 90 4 2 1 6 0 1 0  
3 1.51 1.84 24.6 -0.38 -0.01 26.1 87 4 4 0 4 0 0 0  
4 1.49 2.57 26.0 -0.31 -0.10 21.1 87 3 3 2 3 0 1 0  
5 1.44 1.77 27.1 0.97 0.29 11.0 87 1 3 2 5 0 0 0  
6 1.47 2.32 37.1 -0.17 0.04 17.2 82 3 2 2 3 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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