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PDBsum entry 1pm0

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Pore analysis for: 1pm0 calculated with MOLE 2.0 PDB id
1pm0
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.04 3.04 28.6 -1.86 -0.48 21.5 82 4 2 1 1 2 0 0  CA 404 ATP 1814 C 1813 B T 1903 C G 1906 C A 1907
C A 1908 C T 1909 C C 1910 C C 1911 C
2 1.79 2.97 30.7 -1.88 -0.24 24.0 88 6 2 3 2 1 0 0  CA 404 ATP 1814 C 1813 B T 1903 C A 1908 C
3 2.26 2.28 31.2 -0.37 0.20 22.5 94 4 0 2 2 0 0 0  A 1807 B G 1808 B G 1809 B A 1810 B T 1811 B T
1904 C T 1905 C G 1906 C A 1907 C A 1908 C T 1909
C C 1910 C C 1911 C T 1913 C C 1914 C C 1915 C C
1916 C
4 1.60 1.76 40.3 -2.32 -0.29 29.9 81 6 3 2 2 2 1 0  CA 404 ATP 1814 C 1813 B A 1908 C
5 1.51 1.51 43.6 -1.94 -0.49 24.1 85 6 1 2 1 1 0 0  CA 404 ATP 1814 A 1807 B G 1808 B G 1809 B A 1810
B T 1811 B T 1812 B C 1813 B T 1903 C G 1906 C A
1907 C A 1908 C T 1909 C C 1910 C C 1911 C T 1912
C T 1913 C C 1914 C C 1915 C C 1916 C
6 1.51 1.51 45.3 -2.42 -0.43 26.2 86 6 1 3 1 1 0 0  A 1807 B G 1808 B G 1809 B A 1810 B T 1811 B T
1812 B C 1813 B G 1906 C A 1907 C A 1908 C T 1909
C C 1910 C C 1911 C T 1912 C T 1913 C C 1914 C C
1915 C C 1916 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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