PDBsum entry 1pjs Go to PDB code:  Pore analysis for: 1pjs calculated with MOLE 2.0 PDB id 1pjs Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.98 3.73 27.0 -0.98 -0.11 21.9 74 3 3 2 4 0 1 0  PGE 506 A 2 1.66 2.33 35.8 -1.29 0.01 24.2 82 6 4 2 6 1 0 0  NAD 504 B 3 2.55 2.74 44.9 -1.94 -0.34 32.6 82 8 6 1 4 1 1 0  NAD 504 B 4 1.23 2.19 58.2 -1.96 -0.59 22.5 82 5 6 6 4 2 2 1   5 1.16 2.93 79.9 -1.47 -0.40 18.8 83 5 6 8 5 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.