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PDBsum entry 1pcw

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1pcw calculated with MOLE 2.0 PDB id
1pcw
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.53 3.29 29.8 -2.12 -0.57 23.6 72 4 5 4 3 2 1 0  
2 1.24 1.56 33.5 -0.80 -0.26 8.7 80 3 1 6 3 6 5 0  H4P 1268 A
3 1.71 4.14 52.7 -1.65 -0.38 20.6 75 5 6 1 3 2 2 1  
4 1.26 1.33 53.2 -2.28 -0.67 28.7 70 7 7 0 0 2 4 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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