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PDBsum entry 1oyr
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Pore analysis for: 1oyr calculated with  MOLE 2.0
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PDB id
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1oyr
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.85 |
4.73 |
29.1 |
-1.06 |
0.03 |
22.7 |
78 |
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4 |
4 |
2 |
2 |
3 |
0 |
0 |
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2 |
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2.73 |
2.73 |
56.0 |
-1.42 |
-0.53 |
18.4 |
74 |
10 |
1 |
1 |
2 |
1 |
3 |
0 |
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3 |
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2.80 |
2.80 |
57.5 |
-1.40 |
-0.58 |
17.1 |
76 |
10 |
0 |
1 |
2 |
0 |
2 |
0 |
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4 |
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2.22 |
3.02 |
71.2 |
-1.54 |
-0.19 |
24.1 |
79 |
8 |
5 |
4 |
5 |
3 |
2 |
0 |
SO4 302 A SO4 304 B
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5 |
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2.43 |
2.96 |
93.9 |
-1.30 |
-0.34 |
19.6 |
76 |
12 |
4 |
3 |
4 |
3 |
2 |
0 |
SO4 308 D
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6 |
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1.37 |
1.95 |
113.3 |
-1.25 |
-0.24 |
18.0 |
87 |
7 |
6 |
10 |
4 |
4 |
0 |
0 |
SO4 302 A SO4 304 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program