PDBsum entry 1orm

Pore analysis for: 1orm calculated with

MOLE 2.0

PDB id

1orm

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

7 pores, coloured by radius

7 pores, coloured by radius

7 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.66

1.66

39.9

-1.82

-0.36

20.5

78

2

2

3

2

3

2

0

2

1.22

4.21

51.9

-0.69

-0.26

10.2

93

2

2

7

6

2

1

0

3

1.51

1.52

55.2

-1.24

-0.46

12.3

95

4

3

6

3

1

0

0

4

1.49

1.49

57.0

-0.64

-0.33

9.6

94

3

3

6

5

1

1

0

5

1.21

4.21

67.9

-1.35

-0.38

15.5

91

4

4

8

6

3

1

0

6

1.24

4.21

75.1

-1.37

-0.34

12.1

88

3

2

10

4

5

1

0

7

1.21

1.21

90.2

-1.24

-0.55

10.5

91

4

6

9

4

3

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.